Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
PTPN9P43378 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN9P43378 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PTPN9P43378 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTPN9P43378 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PTPN9P43378 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN9P43378 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.34■□□□□ 0.69
PTPN9P43378 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN9P43378 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN9P43378 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN9P43378 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN9P43378 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN9P43378 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN9P43378 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN9P43378 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PTPN9P43378 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PTPN9P43378 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN9P43378 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN9P43378 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN9P43378 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PTPN9P43378 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN9P43378 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN9P43378 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN9P43378 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.33■□□□□ 0.69
PTPN9P43378 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PTPN9P43378 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN9P43378 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PTPN9P43378 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN9P43378 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN9P43378 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
PTPN9P43378 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN9P43378 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN9P43378 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.33■□□□□ 0.68
PTPN9P43378 AC104390.1-201ENST00000555663 520 ntBASIC19.33■□□□□ 0.68
PTPN9P43378 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 AL138966.2-201ENST00000621997 464 ntBASIC19.33■□□□□ 0.68
PTPN9P43378 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN9P43378 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTPN9P43378 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTPN9P43378 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PTPN9P43378 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
PTPN9P43378 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN9P43378 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PTPN9P43378 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.32■□□□□ 0.68
PTPN9P43378 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTPN9P43378 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 AC104581.1-202ENST00000635932 2618 ntBASIC19.32■□□□□ 0.68
PTPN9P43378 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.32■□□□□ 0.68
PTPN9P43378 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN9P43378 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.32■□□□□ 0.68
PTPN9P43378 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN9P43378 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN9P43378 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN9P43378 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN9P43378 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN9P43378 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms