Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.71□□□□□ -0.21
CKS2P33552 SLC25A6P5-201ENST00000435663 894 ntBASIC13.71□□□□□ -0.21
CKS2P33552 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.71□□□□□ -0.21
CKS2P33552 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CKS2P33552 AC110285.6-201ENST00000617652 491 ntBASIC13.71□□□□□ -0.21
CKS2P33552 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 FLJ16779-201ENST00000612722 7638 ntBASIC13.71□□□□□ -0.21
CKS2P33552 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CKS2P33552 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.71□□□□□ -0.21
CKS2P33552 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.71□□□□□ -0.21
CKS2P33552 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CKS2P33552 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CKS2P33552 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CKS2P33552 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CKS2P33552 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CKS2P33552 KRT8P8-201ENST00000434750 1448 ntBASIC13.71□□□□□ -0.22
CKS2P33552 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.71□□□□□ -0.22
CKS2P33552 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CKS2P33552 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CKS2P33552 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.71□□□□□ -0.22
CKS2P33552 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CKS2P33552 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CKS2P33552 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS2P33552 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS2P33552 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS2P33552 AC012317.2-201ENST00000623305 2251 ntBASIC13.7□□□□□ -0.22
CKS2P33552 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CKS2P33552 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS2P33552 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CKS2P33552 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CKS2P33552 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS2P33552 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS2P33552 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS2P33552 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.7□□□□□ -0.22
CKS2P33552 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.7□□□□□ -0.22
CKS2P33552 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CKS2P33552 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.7□□□□□ -0.22
CKS2P33552 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS2P33552 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS2P33552 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS2P33552 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CKS2P33552 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS2P33552 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.7□□□□□ -0.22
CKS2P33552 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS2P33552 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS2P33552 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.7□□□□□ -0.22
CKS2P33552 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CKS2P33552 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.69□□□□□ -0.22
CKS2P33552 AC135776.1-201ENST00000319817 2481 ntBASIC13.69□□□□□ -0.22
CKS2P33552 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.69□□□□□ -0.22
CKS2P33552 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.69□□□□□ -0.22
CKS2P33552 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.69□□□□□ -0.22
CKS2P33552 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
CKS2P33552 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.69□□□□□ -0.22
CKS2P33552 AC142381.2-201ENST00000566120 298 ntBASIC13.69□□□□□ -0.22
CKS2P33552 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CKS2P33552 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CKS2P33552 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.69□□□□□ -0.22
CKS2P33552 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CKS2P33552 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CKS2P33552 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.68□□□□□ -0.22
CKS2P33552 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CKS2P33552 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms