Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CHRNA3P32297 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.64■□□□□ 0.73
CHRNA3P32297 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.64■□□□□ 0.73
CHRNA3P32297 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.64■□□□□ 0.73
CHRNA3P32297 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.64■□□□□ 0.73
CHRNA3P32297 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.64■□□□□ 0.73
CHRNA3P32297 MIR6786-201ENST00000616843 113 ntBASIC19.64■□□□□ 0.73
CHRNA3P32297 AC133561.5-201ENST00000635547 218 ntBASIC19.64■□□□□ 0.73
CHRNA3P32297 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA3P32297 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.64■□□□□ 0.73
CHRNA3P32297 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.64■□□□□ 0.73
CHRNA3P32297 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.64■□□□□ 0.73
CHRNA3P32297 PCDHB18P-201ENST00000524813 2368 ntBASIC19.64■□□□□ 0.73
CHRNA3P32297 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHRNA3P32297 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA3P32297 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA3P32297 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA3P32297 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA3P32297 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA3P32297 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CHRNA3P32297 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CHRNA3P32297 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA3P32297 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNA3P32297 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CHRNA3P32297 MESTP1-201ENST00000404287 994 ntBASIC19.63■□□□□ 0.73
CHRNA3P32297 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.63■□□□□ 0.73
CHRNA3P32297 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.63■□□□□ 0.73
CHRNA3P32297 B3GAT3P1-201ENST00000471720 806 ntBASIC19.63■□□□□ 0.73
CHRNA3P32297 AC011506.1-201ENST00000474329 610 ntBASIC19.63■□□□□ 0.73
CHRNA3P32297 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.63■□□□□ 0.73
CHRNA3P32297 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.63■□□□□ 0.73
CHRNA3P32297 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.63■□□□□ 0.73
CHRNA3P32297 AL160286.2-201ENST00000567150 934 ntBASIC19.63■□□□□ 0.73
CHRNA3P32297 LINC01023-201ENST00000606054 436 ntBASIC19.63■□□□□ 0.73
CHRNA3P32297 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.63■□□□□ 0.73
CHRNA3P32297 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CHRNA3P32297 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CHRNA3P32297 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA3P32297 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHRNA3P32297 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CHRNA3P32297 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CHRNA3P32297 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CHRNA3P32297 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.62■□□□□ 0.73
CHRNA3P32297 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.62■□□□□ 0.73
CHRNA3P32297 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.62■□□□□ 0.73
CHRNA3P32297 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.62■□□□□ 0.73
CHRNA3P32297 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CHRNA3P32297 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CHRNA3P32297 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CHRNA3P32297 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CHRNA3P32297 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHRNA3P32297 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA3P32297 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CHRNA3P32297 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CHRNA3P32297 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CHRNA3P32297 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 MIR1238-201ENST00000408483 83 ntBASIC19.61■□□□□ 0.73
CHRNA3P32297 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA3P32297 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNA3P32297 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA3P32297 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CHRNA3P32297 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.61■□□□□ 0.73
CHRNA3P32297 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRNA3P32297 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRNA3P32297 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms