Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18■□□□□ 0.47
LDLRP01130 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
LDLRP01130 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.99■□□□□ 0.47
LDLRP01130 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
LDLRP01130 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.99■□□□□ 0.47
LDLRP01130 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 TERF1P1-201ENST00000311003 1181 ntBASIC17.99■□□□□ 0.47
LDLRP01130 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LDLRP01130 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.99■□□□□ 0.47
LDLRP01130 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LDLRP01130 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.99■□□□□ 0.47
LDLRP01130 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.99■□□□□ 0.47
LDLRP01130 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.99■□□□□ 0.47
LDLRP01130 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LDLRP01130 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LDLRP01130 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 LINC01568-207ENST00000641790 1380 ntBASIC17.99■□□□□ 0.47
LDLRP01130 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LDLRP01130 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LDLRP01130 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.99■□□□□ 0.47
LDLRP01130 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LDLRP01130 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LDLRP01130 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.98■□□□□ 0.47
LDLRP01130 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.98■□□□□ 0.47
LDLRP01130 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.98■□□□□ 0.47
LDLRP01130 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.98■□□□□ 0.47
LDLRP01130 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 UNC93B2-201ENST00000285383 730 ntBASIC17.98■□□□□ 0.47
LDLRP01130 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LDLRP01130 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.98■□□□□ 0.47
LDLRP01130 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.98■□□□□ 0.47
LDLRP01130 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
LDLRP01130 NTF6B-201ENST00000591913 560 ntBASIC17.98■□□□□ 0.47
LDLRP01130 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
LDLRP01130 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.98■□□□□ 0.47
LDLRP01130 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.98■□□□□ 0.47
LDLRP01130 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LDLRP01130 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.98■□□□□ 0.47
LDLRP01130 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LDLRP01130 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.98■□□□□ 0.47
LDLRP01130 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
LDLRP01130 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.98■□□□□ 0.47
LDLRP01130 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LDLRP01130 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.98■□□□□ 0.47
LDLRP01130 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.98■□□□□ 0.47
LDLRP01130 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LDLRP01130 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LDLRP01130 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LDLRP01130 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
LDLRP01130 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 AL137013.1-201ENST00000432946 1228 ntBASIC17.97■□□□□ 0.47
LDLRP01130 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LDLRP01130 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.97■□□□□ 0.47
LDLRP01130 NUDT16P1-203ENST00000513809 620 ntBASIC17.97■□□□□ 0.47
LDLRP01130 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.97■□□□□ 0.47
LDLRP01130 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.97■□□□□ 0.47
LDLRP01130 AC073195.1-201ENST00000607241 877 ntBASIC17.97■□□□□ 0.47
LDLRP01130 AP000525.1-201ENST00000608286 694 ntBASIC17.97■□□□□ 0.47
LDLRP01130 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.97■□□□□ 0.47
LDLRP01130 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
LDLRP01130 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LDLRP01130 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms