Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 KRT18P56-201ENST00000507275 550 ntBASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AC011498.5-201ENST00000592027 486 ntBASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AL121672.3-201ENST00000608644 468 ntBASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AC093525.10-201ENST00000625130 1569 ntBASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 MIR662-201ENST00000384847 95 ntBASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 BX276092.5-203ENST00000456199 560 ntBASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AC116562.4-201ENST00000641316 2276 ntBASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 KRT18P41-201ENST00000518924 1277 ntBASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.62■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 HCG11-201ENST00000411553 5696 ntBASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 ATP5G2P1-201ENST00000433580 426 ntBASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
C1QTNF3-AMACRE9PGA6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms