Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 KRT8P32-201ENST00000512863 1461 ntBASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 AL353807.1-201ENST00000427475 662 ntBASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 RPPH1-201ENST00000516869 333 ntBASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 AC011298.2-201ENST00000617989 482 ntBASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CPSF4LA6NMK7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CPSF4LA6NMK7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CPSF4LA6NMK7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CPSF4LA6NMK7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.21■□□□□ 0.34
CPSF4LA6NMK7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 AC005332.8-201ENST00000622750 2735 ntBASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CPSF4LA6NMK7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 AC026471.1-201ENST00000564629 3026 ntBASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 AL133373.2-201ENST00000623187 2828 ntBASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 AL031985.4-201ENST00000642138 673 ntBASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 OR6D1P-202ENST00000641007 5290 ntBASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CPSF4LA6NMK7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.18■□□□□ 0.34
CPSF4LA6NMK7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CPSF4LA6NMK7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CPSF4LA6NMK7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms