Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC008556.1-201ENST00000610908 2040 ntBASIC18.78■□□□□ 0.6
TCRBV9S1A1TA0A576 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 KSR1P1-201ENST00000446298 240 ntBASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 AP002982.1-201ENST00000492365 877 ntBASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 ESPNP-201ENST00000270691 2015 ntBASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.77■□□□□ 0.6
TCRBV9S1A1TA0A576 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TCRBV9S1A1TA0A576 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TCRBV9S1A1TA0A576 HTR7P1-201ENST00000538670 1336 ntBASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 CKBP1-201ENST00000565489 1086 ntBASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV9S1A1TA0A576 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 AC008040.2-201ENST00000461049 708 ntBASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 MYLKP1-201ENST00000509077 1580 ntBASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV9S1A1TA0A576 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 KRT18P6-201ENST00000555540 1265 ntBASIC18.74■□□□□ 0.59
TCRBV9S1A1TA0A576 AC026271.3-201ENST00000571884 352 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms