Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 MIR3180-5-201ENST00000583743 153 ntBASIC18.72■□□□□ 0.59
PKP3Q9Y446 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.72■□□□□ 0.59
PKP3Q9Y446 AL357033.4-201ENST00000617703 1807 ntBASIC18.72■□□□□ 0.59
PKP3Q9Y446 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PKP3Q9Y446 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
PKP3Q9Y446 ANO7L1-203ENST00000602586 1720 ntBASIC18.71■□□□□ 0.59
PKP3Q9Y446 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 ECEL1P2-202ENST00000465689 757 ntBASIC18.71■□□□□ 0.59
PKP3Q9Y446 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 MIR4674-201ENST00000582457 87 ntBASIC18.71■□□□□ 0.59
PKP3Q9Y446 AC145285.6-201ENST00000604632 637 ntBASIC18.71■□□□□ 0.59
PKP3Q9Y446 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.71■□□□□ 0.59
PKP3Q9Y446 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PKP3Q9Y446 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.71■□□□□ 0.58
PKP3Q9Y446 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PKP3Q9Y446 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PKP3Q9Y446 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 INGX-201ENST00000359239 846 ntBASIC18.7■□□□□ 0.58
PKP3Q9Y446 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 AL512604.3-201ENST00000569583 964 ntBASIC18.7■□□□□ 0.58
PKP3Q9Y446 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 AC133561.5-201ENST00000635547 218 ntBASIC18.7■□□□□ 0.58
PKP3Q9Y446 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PKP3Q9Y446 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PKP3Q9Y446 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.69■□□□□ 0.58
PKP3Q9Y446 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 AC036111.1-201ENST00000533973 1582 ntBASIC18.69■□□□□ 0.58
PKP3Q9Y446 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.69■□□□□ 0.58
PKP3Q9Y446 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 HMGA1P5-201ENST00000412453 271 ntBASIC18.69■□□□□ 0.58
PKP3Q9Y446 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.69■□□□□ 0.58
PKP3Q9Y446 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PKP3Q9Y446 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.69■□□□□ 0.58
PKP3Q9Y446 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PKP3Q9Y446 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
PKP3Q9Y446 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PKP3Q9Y446 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PKP3Q9Y446 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PKP3Q9Y446 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PKP3Q9Y446 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms