Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF6Q9Y252 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF6Q9Y252 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF6Q9Y252 AC092865.7-201ENST00000641832 219 ntBASIC17.57■□□□□ 0.4
RNF6Q9Y252 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF6Q9Y252 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF6Q9Y252 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF6Q9Y252 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF6Q9Y252 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF6Q9Y252 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 KRT16P1-201ENST00000399124 1418 ntBASIC17.56■□□□□ 0.4
RNF6Q9Y252 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 LINC01568-207ENST00000641790 1380 ntBASIC17.56■□□□□ 0.4
RNF6Q9Y252 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 AL390955.1-201ENST00000428694 934 ntBASIC17.56■□□□□ 0.4
RNF6Q9Y252 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 AC116562.2-201ENST00000507042 360 ntBASIC17.56■□□□□ 0.4
RNF6Q9Y252 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF6Q9Y252 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF6Q9Y252 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 AC116351.2-201ENST00000606540 1585 ntBASIC17.55■□□□□ 0.4
RNF6Q9Y252 AC005521.1-201ENST00000393351 872 ntBASIC17.55■□□□□ 0.4
RNF6Q9Y252 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 KRT18P35-201ENST00000510488 1269 ntBASIC17.55■□□□□ 0.4
RNF6Q9Y252 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 NAPSB-206ENST00000562112 1266 ntBASIC17.55■□□□□ 0.4
RNF6Q9Y252 AL049597.2-201ENST00000565575 961 ntBASIC17.55■□□□□ 0.4
RNF6Q9Y252 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 IRX1P1-201ENST00000438849 1838 ntBASIC17.55■□□□□ 0.4
RNF6Q9Y252 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF6Q9Y252 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF6Q9Y252 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms