Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX41Q9UJV9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX41Q9UJV9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX41Q9UJV9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
DDX41Q9UJV9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DDX41Q9UJV9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX41Q9UJV9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.43■■□□□ 1.02
DDX41Q9UJV9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
DDX41Q9UJV9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 KRT18P38-201ENST00000449496 1282 ntBASIC21.42■■□□□ 1.02
DDX41Q9UJV9 AL359075.1-203ENST00000462729 1002 ntBASIC21.42■■□□□ 1.02
DDX41Q9UJV9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.42■■□□□ 1.02
DDX41Q9UJV9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 FAM86EP-206ENST00000510506 987 ntBASIC21.41■■□□□ 1.02
DDX41Q9UJV9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 FZD10-202ENST00000539839 3282 ntBASIC21.41■■□□□ 1.02
DDX41Q9UJV9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
DDX41Q9UJV9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.4■■□□□ 1.02
DDX41Q9UJV9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 AP000523.1-201ENST00000398242 1049 ntBASIC21.4■■□□□ 1.02
DDX41Q9UJV9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 CR769767.2-201ENST00000622735 460 ntBASIC21.4■■□□□ 1.02
DDX41Q9UJV9 AL121956.5-201ENST00000625261 221 ntBASIC21.4■■□□□ 1.02
DDX41Q9UJV9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.4■■□□□ 1.02
DDX41Q9UJV9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
DDX41Q9UJV9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.39■■□□□ 1.02
DDX41Q9UJV9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.39■■□□□ 1.02
DDX41Q9UJV9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.39■■□□□ 1.02
DDX41Q9UJV9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX41Q9UJV9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX41Q9UJV9 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.39■■□□□ 1.02
DDX41Q9UJV9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
DDX41Q9UJV9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX41Q9UJV9 Z82202.1-201ENST00000623446 1880 ntBASIC21.39■■□□□ 1.02
DDX41Q9UJV9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX41Q9UJV9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DDX41Q9UJV9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX41Q9UJV9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.39■■□□□ 1.01
DDX41Q9UJV9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
DDX41Q9UJV9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX41Q9UJV9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX41Q9UJV9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX41Q9UJV9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
DDX41Q9UJV9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DDX41Q9UJV9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.39■■□□□ 1.01
DDX41Q9UJV9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms