Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 EMBP1-201ENST00000458200 901 ntBASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 AC012615.1-201ENST00000565797 1299 ntBASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 FP475955.4-201ENST00000623131 1990 ntBASIC19.43■□□□□ 0.7
DNMT3BQ9UBC3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 FOSL1P1-201ENST00000511041 816 ntBASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 KRT8P10-201ENST00000450021 1447 ntBASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DNMT3BQ9UBC3 AC141586.3-201ENST00000562166 1838 ntBASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 AC091304.2-201ENST00000564639 760 ntBASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 MIR3180-4-201ENST00000582223 153 ntBASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 AC090616.6-201ENST00000582640 721 ntBASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 AL121772.3-201ENST00000610840 674 ntBASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 IGHV3-41-201ENST00000613121 348 ntBASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.41■□□□□ 0.7
DNMT3BQ9UBC3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 AC068587.9-201ENST00000641814 219 ntBASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
DNMT3BQ9UBC3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms