Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2NP61088 BX664615.1-201ENST00000443558 458 ntBASIC16.4■□□□□ 0.22
UBE2NP61088 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE2NP61088 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE2NP61088 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.4■□□□□ 0.22
UBE2NP61088 RN7SL850P-201ENST00000579959 291 ntBASIC16.4■□□□□ 0.22
UBE2NP61088 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2NP61088 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
UBE2NP61088 AC141257.4-201ENST00000634557 245 ntBASIC16.4■□□□□ 0.22
UBE2NP61088 AC136944.6-201ENST00000634818 245 ntBASIC16.4■□□□□ 0.22
UBE2NP61088 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
UBE2NP61088 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBE2NP61088 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2NP61088 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2NP61088 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2NP61088 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2NP61088 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE2NP61088 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UBE2NP61088 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2NP61088 KRT8P32-201ENST00000512863 1461 ntBASIC16.4■□□□□ 0.22
UBE2NP61088 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE2NP61088 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
UBE2NP61088 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2NP61088 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE2NP61088 AL109659.2-201ENST00000606809 1674 ntBASIC16.4■□□□□ 0.22
UBE2NP61088 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
UBE2NP61088 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
UBE2NP61088 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2NP61088 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2NP61088 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
UBE2NP61088 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
UBE2NP61088 AC036111.1-201ENST00000533973 1582 ntBASIC16.39■□□□□ 0.21
UBE2NP61088 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
UBE2NP61088 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2NP61088 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2NP61088 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
UBE2NP61088 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2NP61088 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.39■□□□□ 0.21
UBE2NP61088 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.39■□□□□ 0.21
UBE2NP61088 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.39■□□□□ 0.21
UBE2NP61088 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 AC140113.3-201ENST00000605663 199 ntBASIC16.39■□□□□ 0.21
UBE2NP61088 CR769767.2-201ENST00000622735 460 ntBASIC16.39■□□□□ 0.21
UBE2NP61088 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE2NP61088 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
UBE2NP61088 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE2NP61088 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE2NP61088 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.38■□□□□ 0.21
UBE2NP61088 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
UBE2NP61088 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UBE2NP61088 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
UBE2NP61088 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.38■□□□□ 0.21
UBE2NP61088 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.38■□□□□ 0.21
UBE2NP61088 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBE2NP61088 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.38■□□□□ 0.21
UBE2NP61088 WWOX-216ENST00000569818 525 ntBASIC16.38■□□□□ 0.21
UBE2NP61088 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.38■□□□□ 0.21
UBE2NP61088 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.38■□□□□ 0.21
UBE2NP61088 AL031432.5-201ENST00000641059 760 ntBASIC16.38■□□□□ 0.21
UBE2NP61088 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UBE2NP61088 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
UBE2NP61088 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.38■□□□□ 0.21
UBE2NP61088 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBE2NP61088 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms