Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
CHMP4BP1P59074 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.28■■□□□ 1
CHMP4BP1P59074 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 VENTXP5-201ENST00000523979 775 ntBASIC21.28■■□□□ 1
CHMP4BP1P59074 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.28■■□□□ 1
CHMP4BP1P59074 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.28■■□□□ 1
CHMP4BP1P59074 GCSHP2-201ENST00000560971 527 ntBASIC21.28■■□□□ 1
CHMP4BP1P59074 AL121894.2-201ENST00000602977 491 ntBASIC21.28■■□□□ 1
CHMP4BP1P59074 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.28■■□□□ 1
CHMP4BP1P59074 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.28■■□□□ 1
CHMP4BP1P59074 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.28■■□□□ 1
CHMP4BP1P59074 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.28■■□□□ 1
CHMP4BP1P59074 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHMP4BP1P59074 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP4BP1P59074 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.28■■□□□ 1
CHMP4BP1P59074 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.28■■□□□ 1
CHMP4BP1P59074 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.27■■□□□ 1
CHMP4BP1P59074 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP4BP1P59074 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP4BP1P59074 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.27■■□□□ 1
CHMP4BP1P59074 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.27■■□□□ 1
CHMP4BP1P59074 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP4BP1P59074 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHMP4BP1P59074 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.27■■□□□ 1
CHMP4BP1P59074 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP4BP1P59074 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.27■■□□□ 1
CHMP4BP1P59074 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.27■■□□□ 1
CHMP4BP1P59074 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.27■■□□□ 1
CHMP4BP1P59074 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.27■■□□□ 1
CHMP4BP1P59074 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.27■■□□□ 1
CHMP4BP1P59074 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP4BP1P59074 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP4BP1P59074 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.27■□□□□ 0.99
CHMP4BP1P59074 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHMP4BP1P59074 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CHMP4BP1P59074 AC005332.1-201ENST00000577698 1310 ntBASIC21.27■□□□□ 0.99
CHMP4BP1P59074 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHMP4BP1P59074 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 AC005082.1-201ENST00000413042 2259 ntBASIC21.26■□□□□ 0.99
CHMP4BP1P59074 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHMP4BP1P59074 AC104417.2-201ENST00000562989 1793 ntBASIC21.25■□□□□ 0.99
CHMP4BP1P59074 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP4BP1P59074 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms