Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PER3P56645 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PER3P56645 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 AC120498.9-201ENST00000339021 3867 ntBASIC17.25■□□□□ 0.35
PER3P56645 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
PER3P56645 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PER3P56645 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.25■□□□□ 0.35
PER3P56645 FZD10-202ENST00000539839 3282 ntBASIC17.25■□□□□ 0.35
PER3P56645 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PER3P56645 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PER3P56645 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.24■□□□□ 0.35
PER3P56645 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.24■□□□□ 0.35
PER3P56645 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.24■□□□□ 0.35
PER3P56645 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.24■□□□□ 0.35
PER3P56645 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 AL023803.3-201ENST00000615559 522 ntBASIC17.24■□□□□ 0.35
PER3P56645 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PER3P56645 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.24■□□□□ 0.35
PER3P56645 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PER3P56645 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PER3P56645 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.24■□□□□ 0.35
PER3P56645 NOC2LP1-202ENST00000452600 2235 ntBASIC17.24■□□□□ 0.35
PER3P56645 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PER3P56645 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PER3P56645 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PER3P56645 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.23■□□□□ 0.35
PER3P56645 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PER3P56645 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.23■□□□□ 0.35
PER3P56645 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PER3P56645 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.23■□□□□ 0.35
PER3P56645 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.23■□□□□ 0.35
PER3P56645 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.23■□□□□ 0.35
PER3P56645 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.23■□□□□ 0.35
PER3P56645 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.23■□□□□ 0.35
PER3P56645 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 AC008040.2-201ENST00000461049 708 ntBASIC17.23■□□□□ 0.35
PER3P56645 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.23■□□□□ 0.35
PER3P56645 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.23■□□□□ 0.35
PER3P56645 AL160286.2-201ENST00000567150 934 ntBASIC17.23■□□□□ 0.35
PER3P56645 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.23■□□□□ 0.35
PER3P56645 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PER3P56645 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PER3P56645 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PER3P56645 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
PER3P56645 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PER3P56645 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PER3P56645 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.22■□□□□ 0.35
PER3P56645 AC125437.2-201ENST00000625180 2167 ntBASIC17.22■□□□□ 0.35
PER3P56645 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.22■□□□□ 0.35
PER3P56645 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.22■□□□□ 0.35
PER3P56645 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.22■□□□□ 0.35
PER3P56645 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.22■□□□□ 0.35
PER3P56645 AL136038.3-201ENST00000561909 1096 ntBASIC17.22■□□□□ 0.35
PER3P56645 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.22■□□□□ 0.35
PER3P56645 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.22■□□□□ 0.35
PER3P56645 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.22■□□□□ 0.35
PER3P56645 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PER3P56645 AL023973.1-201ENST00000624619 620 ntBASIC17.22■□□□□ 0.35
PER3P56645 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PER3P56645 AC009237.14-201ENST00000609975 1594 ntBASIC17.22■□□□□ 0.35
PER3P56645 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PER3P56645 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms