Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.07■□□□□ 0.64
CDH4P55283 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH4P55283 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH4P55283 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH4P55283 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH4P55283 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH4P55283 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH4P55283 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.06■□□□□ 0.64
CDH4P55283 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
CDH4P55283 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH4P55283 KRT18P38-201ENST00000449496 1282 ntBASIC19.06■□□□□ 0.64
CDH4P55283 RASA4DP-201ENST00000460726 1199 ntBASIC19.06■□□□□ 0.64
CDH4P55283 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH4P55283 KRT18P35-201ENST00000510488 1269 ntBASIC19.06■□□□□ 0.64
CDH4P55283 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH4P55283 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH4P55283 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH4P55283 MIR3180-4-201ENST00000582223 153 ntBASIC19.06■□□□□ 0.64
CDH4P55283 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH4P55283 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDH4P55283 AC010240.3-201ENST00000607688 395 ntBASIC19.06■□□□□ 0.64
CDH4P55283 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH4P55283 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH4P55283 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH4P55283 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH4P55283 AP000974.1-201ENST00000623909 2387 ntBASIC19.06■□□□□ 0.64
CDH4P55283 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH4P55283 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDH4P55283 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH4P55283 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH4P55283 AC018445.3-201ENST00000624177 1945 ntBASIC19.06■□□□□ 0.64
CDH4P55283 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH4P55283 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDH4P55283 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH4P55283 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDH4P55283 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 SPDYE15P-201ENST00000424157 909 ntBASIC19.05■□□□□ 0.64
CDH4P55283 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.05■□□□□ 0.64
CDH4P55283 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH4P55283 AL445228.2-201ENST00000605589 952 ntBASIC19.05■□□□□ 0.64
CDH4P55283 MYC-208ENST00000641036 567 ntBASIC19.05■□□□□ 0.64
CDH4P55283 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDH4P55283 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDH4P55283 AC112777.1-201ENST00000540175 1423 ntBASIC19.05■□□□□ 0.64
CDH4P55283 KRT8P50-201ENST00000562022 1438 ntBASIC19.05■□□□□ 0.64
CDH4P55283 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH4P55283 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDH4P55283 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH4P55283 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CDH4P55283 AC120498.9-201ENST00000339021 3867 ntBASIC19.04■□□□□ 0.64
CDH4P55283 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDH4P55283 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH4P55283 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH4P55283 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH4P55283 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.04■□□□□ 0.64
CDH4P55283 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH4P55283 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.04■□□□□ 0.64
CDH4P55283 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDH4P55283 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH4P55283 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH4P55283 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDH4P55283 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CDH4P55283 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.03■□□□□ 0.64
CDH4P55283 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CDH4P55283 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.03■□□□□ 0.64
CDH4P55283 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.03■□□□□ 0.64
CDH4P55283 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms