Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.22■□□□□ 0.67
COPAP53621 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.22■□□□□ 0.67
COPAP53621 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.22■□□□□ 0.67
COPAP53621 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.22■□□□□ 0.67
COPAP53621 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.22■□□□□ 0.67
COPAP53621 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.22■□□□□ 0.67
COPAP53621 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.22■□□□□ 0.67
COPAP53621 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.22■□□□□ 0.67
COPAP53621 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.22■□□□□ 0.67
COPAP53621 MIR4674-201ENST00000582457 87 ntBASIC19.22■□□□□ 0.67
COPAP53621 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.22■□□□□ 0.67
COPAP53621 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.22■□□□□ 0.67
COPAP53621 AC140113.3-201ENST00000605663 199 ntBASIC19.22■□□□□ 0.67
COPAP53621 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.22■□□□□ 0.67
COPAP53621 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
COPAP53621 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.22■□□□□ 0.67
COPAP53621 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
COPAP53621 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COPAP53621 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPAP53621 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.22■□□□□ 0.67
COPAP53621 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.21■□□□□ 0.67
COPAP53621 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
COPAP53621 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COPAP53621 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COPAP53621 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.21■□□□□ 0.67
COPAP53621 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.21■□□□□ 0.67
COPAP53621 TSPY23P-201ENST00000440136 739 ntBASIC19.21■□□□□ 0.67
COPAP53621 SDHAP1-207ENST00000440850 2000 ntBASIC19.21■□□□□ 0.67
COPAP53621 AL359075.1-203ENST00000462729 1002 ntBASIC19.21■□□□□ 0.67
COPAP53621 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.21■□□□□ 0.67
COPAP53621 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 AC008622.2-201ENST00000617006 1229 ntBASIC19.21■□□□□ 0.67
COPAP53621 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.21■□□□□ 0.67
COPAP53621 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COPAP53621 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
COPAP53621 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COPAP53621 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COPAP53621 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
COPAP53621 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
COPAP53621 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.2■□□□□ 0.66
COPAP53621 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.2■□□□□ 0.66
COPAP53621 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 UPK3BP1-201ENST00000428678 509 ntBASIC19.2■□□□□ 0.66
COPAP53621 KRT18P38-201ENST00000449496 1282 ntBASIC19.2■□□□□ 0.66
COPAP53621 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.2■□□□□ 0.66
COPAP53621 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.2■□□□□ 0.66
COPAP53621 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
COPAP53621 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.2■□□□□ 0.66
COPAP53621 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.2■□□□□ 0.66
COPAP53621 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.2■□□□□ 0.66
COPAP53621 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.2■□□□□ 0.66
COPAP53621 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COPAP53621 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COPAP53621 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.19■□□□□ 0.66
COPAP53621 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COPAP53621 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.19■□□□□ 0.66
COPAP53621 AC007613.1-201ENST00000572811 2597 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms