Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDR1P51861 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDR1P51861 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDR1P51861 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDR1P51861 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDR1P51861 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.39■□□□□ 0.86
CDR1P51861 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDR1P51861 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR1P51861 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.39■□□□□ 0.85
CDR1P51861 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDR1P51861 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDR1P51861 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.39■□□□□ 0.85
CDR1P51861 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDR1P51861 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDR1P51861 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR1P51861 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDR1P51861 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.39■□□□□ 0.85
CDR1P51861 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.39■□□□□ 0.85
CDR1P51861 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.39■□□□□ 0.85
CDR1P51861 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.39■□□□□ 0.85
CDR1P51861 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.39■□□□□ 0.85
CDR1P51861 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.39■□□□□ 0.85
CDR1P51861 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR1P51861 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR1P51861 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.39■□□□□ 0.85
CDR1P51861 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDR1P51861 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.38■□□□□ 0.85
CDR1P51861 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CDR1P51861 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDR1P51861 AL137013.1-201ENST00000432946 1228 ntBASIC20.38■□□□□ 0.85
CDR1P51861 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.38■□□□□ 0.85
CDR1P51861 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.38■□□□□ 0.85
CDR1P51861 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.38■□□□□ 0.85
CDR1P51861 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.38■□□□□ 0.85
CDR1P51861 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.38■□□□□ 0.85
CDR1P51861 C2orf69P3-201ENST00000565542 1120 ntBASIC20.38■□□□□ 0.85
CDR1P51861 AP005242.2-201ENST00000580065 1175 ntBASIC20.38■□□□□ 0.85
CDR1P51861 DGCR10-201ENST00000609839 495 ntBASIC20.38■□□□□ 0.85
CDR1P51861 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CDR1P51861 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.38■□□□□ 0.85
CDR1P51861 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CDR1P51861 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CDR1P51861 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDR1P51861 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDR1P51861 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 KRT8P11-201ENST00000409686 1436 ntBASIC20.37■□□□□ 0.85
CDR1P51861 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDR1P51861 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDR1P51861 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 AC113347.1-201ENST00000413321 391 ntBASIC20.37■□□□□ 0.85
CDR1P51861 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.37■□□□□ 0.85
CDR1P51861 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
CDR1P51861 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 FAM87A-204ENST00000613235 858 ntBASIC20.37■□□□□ 0.85
CDR1P51861 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.37■□□□□ 0.85
CDR1P51861 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CDR1P51861 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 LTB4R2-202ENST00000528054 3092 ntBASIC20.37■□□□□ 0.85
CDR1P51861 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDR1P51861 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.37■□□□□ 0.85
CDR1P51861 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.36■□□□□ 0.85
CDR1P51861 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.36■□□□□ 0.85
CDR1P51861 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.36■□□□□ 0.85
CDR1P51861 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.36■□□□□ 0.85
CDR1P51861 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.36■□□□□ 0.85
CDR1P51861 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.36■□□□□ 0.85
CDR1P51861 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.36■□□□□ 0.85
CDR1P51861 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms