Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A6P48664 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A6P48664 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A6P48664 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC1A6P48664 LINC00896-202ENST00000609602 2128 ntBASIC18.37■□□□□ 0.53
SLC1A6P48664 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A6P48664 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC1A6P48664 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
SLC1A6P48664 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SLC1A6P48664 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC1A6P48664 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLC1A6P48664 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC1A6P48664 NBPF21P-201ENST00000425093 1451 ntBASIC18.36■□□□□ 0.53
SLC1A6P48664 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC1A6P48664 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC1A6P48664 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC1A6P48664 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC1A6P48664 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC1A6P48664 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC1A6P48664 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC1A6P48664 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC1A6P48664 AL137784.2-201ENST00000607332 1000 ntBASIC18.36■□□□□ 0.53
SLC1A6P48664 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLC1A6P48664 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC1A6P48664 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A6P48664 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A6P48664 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A6P48664 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SLC1A6P48664 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC1A6P48664 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A6P48664 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC1A6P48664 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC1A6P48664 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.35■□□□□ 0.53
SLC1A6P48664 AC138028.4-201ENST00000564984 1845 ntBASIC18.35■□□□□ 0.53
SLC1A6P48664 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC1A6P48664 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A6P48664 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC1A6P48664 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC1A6P48664 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A6P48664 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC1A6P48664 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A6P48664 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SLC1A6P48664 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLC1A6P48664 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC1A6P48664 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC1A6P48664 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SLC1A6P48664 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC1A6P48664 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC1A6P48664 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A6P48664 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC1A6P48664 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A6P48664 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC1A6P48664 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A6P48664 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SLC1A6P48664 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SLC1A6P48664 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC1A6P48664 AL357033.4-201ENST00000617703 1807 ntBASIC18.34■□□□□ 0.53
SLC1A6P48664 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A6P48664 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A6P48664 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC1A6P48664 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SLC1A6P48664 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms