Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.67■□□□□ 0.74
RFC1P35251 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.67■□□□□ 0.74
RFC1P35251 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RFC1P35251 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 AL109659.2-201ENST00000606809 1674 ntBASIC19.66■□□□□ 0.74
RFC1P35251 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.66■□□□□ 0.74
RFC1P35251 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RFC1P35251 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.66■□□□□ 0.74
RFC1P35251 AL023284.2-201ENST00000405850 579 ntBASIC19.66■□□□□ 0.74
RFC1P35251 AL023803.3-201ENST00000615559 522 ntBASIC19.66■□□□□ 0.74
RFC1P35251 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RFC1P35251 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RFC1P35251 NEFHP1-201ENST00000412845 2629 ntBASIC19.66■□□□□ 0.74
RFC1P35251 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.66■□□□□ 0.74
RFC1P35251 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.66■□□□□ 0.74
RFC1P35251 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.65■□□□□ 0.74
RFC1P35251 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.65■□□□□ 0.74
RFC1P35251 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.65■□□□□ 0.74
RFC1P35251 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.65■□□□□ 0.74
RFC1P35251 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.65■□□□□ 0.74
RFC1P35251 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
RFC1P35251 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.65■□□□□ 0.74
RFC1P35251 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RFC1P35251 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFC1P35251 AC126763.1-201ENST00000552015 2118 ntBASIC19.64■□□□□ 0.74
RFC1P35251 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RFC1P35251 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.64■□□□□ 0.74
RFC1P35251 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.64■□□□□ 0.74
RFC1P35251 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFC1P35251 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RFC1P35251 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.64■□□□□ 0.73
RFC1P35251 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC1P35251 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.64■□□□□ 0.73
RFC1P35251 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFC1P35251 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.64■□□□□ 0.73
RFC1P35251 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFC1P35251 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
RFC1P35251 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFC1P35251 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC1P35251 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.64■□□□□ 0.73
RFC1P35251 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.64■□□□□ 0.73
RFC1P35251 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFC1P35251 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFC1P35251 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFC1P35251 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.63■□□□□ 0.73
RFC1P35251 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
RFC1P35251 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.63■□□□□ 0.73
RFC1P35251 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RFC1P35251 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.63■□□□□ 0.73
RFC1P35251 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.63■□□□□ 0.73
RFC1P35251 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.63■□□□□ 0.73
RFC1P35251 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RFC1P35251 MIR4674-201ENST00000582457 87 ntBASIC19.63■□□□□ 0.73
RFC1P35251 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.63■□□□□ 0.73
RFC1P35251 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RFC1P35251 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFC1P35251 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms