Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
KRT4P19013 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
KRT4P19013 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.73■□□□□ 0.59
KRT4P19013 SLC29A4P1-201ENST00000398760 971 ntBASIC18.73■□□□□ 0.59
KRT4P19013 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
KRT4P19013 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
KRT4P19013 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT4P19013 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT4P19013 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.72■□□□□ 0.59
KRT4P19013 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
KRT4P19013 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
KRT4P19013 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KRT4P19013 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
KRT4P19013 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT4P19013 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
KRT4P19013 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 GUSBP6-202ENST00000438529 1198 ntBASIC18.72■□□□□ 0.59
KRT4P19013 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT4P19013 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT4P19013 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
KRT4P19013 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 MYC-208ENST00000641036 567 ntBASIC18.72■□□□□ 0.59
KRT4P19013 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
KRT4P19013 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.72■□□□□ 0.59
KRT4P19013 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT4P19013 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT4P19013 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KRT4P19013 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KRT4P19013 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KRT4P19013 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT4P19013 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT4P19013 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
KRT4P19013 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.71■□□□□ 0.59
KRT4P19013 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 GNAS-203ENST00000306120 1878 ntBASIC18.71■□□□□ 0.59
KRT4P19013 AC093677.2-201ENST00000600169 1863 ntBASIC18.71■□□□□ 0.59
KRT4P19013 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KRT4P19013 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.71■□□□□ 0.59
KRT4P19013 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
KRT4P19013 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
KRT4P19013 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
KRT4P19013 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 AC006970.2-201ENST00000450065 779 ntBASIC18.71■□□□□ 0.59
KRT4P19013 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.71■□□□□ 0.59
KRT4P19013 C1QL1P1-201ENST00000568105 661 ntBASIC18.71■□□□□ 0.59
KRT4P19013 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.71■□□□□ 0.59
KRT4P19013 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.71■□□□□ 0.59
KRT4P19013 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT4P19013 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.71■□□□□ 0.59
KRT4P19013 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.71■□□□□ 0.59
KRT4P19013 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT4P19013 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
KRT4P19013 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT4P19013 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms