Protein–RNA interactions for Protein: P13637

ATP1A3, Sodium/potassium-transporting ATPase subunit alpha-3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3P13637 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP1A3P13637 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP1A3P13637 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP1A3P13637 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP1A3P13637 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP1A3P13637 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP1A3P13637 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP1A3P13637 KRT8P45-201ENST00000414328 1447 ntBASIC20.6■□□□□ 0.89
ATP1A3P13637 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP1A3P13637 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP1A3P13637 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP1A3P13637 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATP1A3P13637 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP1A3P13637 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP1A3P13637 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
ATP1A3P13637 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP1A3P13637 KRASP1-201ENST00000407852 552 ntBASIC20.59■□□□□ 0.89
ATP1A3P13637 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP1A3P13637 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP1A3P13637 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ATP1A3P13637 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP1A3P13637 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
ATP1A3P13637 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP1A3P13637 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
ATP1A3P13637 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP1A3P13637 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP1A3P13637 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP1A3P13637 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP1A3P13637 LINC00896-202ENST00000609602 2128 ntBASIC20.59■□□□□ 0.89
ATP1A3P13637 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP1A3P13637 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP1A3P13637 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP1A3P13637 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP1A3P13637 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP1A3P13637 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP1A3P13637 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP1A3P13637 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.58■□□□□ 0.89
ATP1A3P13637 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP1A3P13637 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP1A3P13637 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ATP1A3P13637 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.58■□□□□ 0.89
ATP1A3P13637 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP1A3P13637 AC004980.1-204ENST00000429707 299 ntBASIC20.58■□□□□ 0.89
ATP1A3P13637 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.58■□□□□ 0.89
ATP1A3P13637 AL445675.2-201ENST00000620291 557 ntBASIC20.58■□□□□ 0.89
ATP1A3P13637 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
ATP1A3P13637 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP1A3P13637 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.58■□□□□ 0.88
ATP1A3P13637 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP1A3P13637 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP1A3P13637 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ATP1A3P13637 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP1A3P13637 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP1A3P13637 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
ATP1A3P13637 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP1A3P13637 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP1A3P13637 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP1A3P13637 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP1A3P13637 AC008556.1-201ENST00000610908 2040 ntBASIC20.58■□□□□ 0.88
ATP1A3P13637 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.58■□□□□ 0.88
ATP1A3P13637 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATP1A3P13637 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATP1A3P13637 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ATP1A3P13637 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ATP1A3P13637 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATP1A3P13637 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP1A3P13637 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 KRT16P5-201ENST00000455284 522 ntBASIC20.57■□□□□ 0.88
ATP1A3P13637 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ATP1A3P13637 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP1A3P13637 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 AC112777.1-201ENST00000540175 1423 ntBASIC20.57■□□□□ 0.88
ATP1A3P13637 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP1A3P13637 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP1A3P13637 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 REXO1L9P-201ENST00000604264 2108 ntBASIC20.57■□□□□ 0.88
ATP1A3P13637 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.57■□□□□ 0.88
ATP1A3P13637 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP1A3P13637 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.56■□□□□ 0.88
ATP1A3P13637 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP1A3P13637 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ATP1A3P13637 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ATP1A3P13637 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP1A3P13637 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATP1A3P13637 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP1A3P13637 AL355802.2-201ENST00000402069 882 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms