Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.82■□□□□ 0.6
SRPRAP08240 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SRPRAP08240 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SRPRAP08240 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.82■□□□□ 0.6
SRPRAP08240 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.82■□□□□ 0.6
SRPRAP08240 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.82■□□□□ 0.6
SRPRAP08240 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.82■□□□□ 0.6
SRPRAP08240 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SRPRAP08240 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.82■□□□□ 0.6
SRPRAP08240 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SRPRAP08240 AC093458.2-201ENST00000623150 629 ntBASIC18.82■□□□□ 0.6
SRPRAP08240 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 AC116562.4-201ENST00000641316 2276 ntBASIC18.82■□□□□ 0.6
SRPRAP08240 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SRPRAP08240 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SRPRAP08240 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRPRAP08240 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.81■□□□□ 0.6
SRPRAP08240 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.81■□□□□ 0.6
SRPRAP08240 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.81■□□□□ 0.6
SRPRAP08240 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SRPRAP08240 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.81■□□□□ 0.6
SRPRAP08240 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.81■□□□□ 0.6
SRPRAP08240 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.81■□□□□ 0.6
SRPRAP08240 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.81■□□□□ 0.6
SRPRAP08240 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.81■□□□□ 0.6
SRPRAP08240 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.81■□□□□ 0.6
SRPRAP08240 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SRPRAP08240 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SRPRAP08240 AL162741.1-201ENST00000565563 1558 ntBASIC18.81■□□□□ 0.6
SRPRAP08240 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRPRAP08240 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRPRAP08240 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.8■□□□□ 0.6
SRPRAP08240 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.8■□□□□ 0.6
SRPRAP08240 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SRPRAP08240 AL049812.1-201ENST00000432563 2267 ntBASIC18.8■□□□□ 0.6
SRPRAP08240 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRPRAP08240 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRPRAP08240 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.8■□□□□ 0.6
SRPRAP08240 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.8■□□□□ 0.6
SRPRAP08240 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.8■□□□□ 0.6
SRPRAP08240 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.8■□□□□ 0.6
SRPRAP08240 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.8■□□□□ 0.6
SRPRAP08240 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.8■□□□□ 0.6
SRPRAP08240 AC011498.5-201ENST00000592027 486 ntBASIC18.8■□□□□ 0.6
SRPRAP08240 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.8■□□□□ 0.6
SRPRAP08240 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRPRAP08240 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRPRAP08240 KRT8P50-201ENST00000562022 1438 ntBASIC18.8■□□□□ 0.6
SRPRAP08240 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.8■□□□□ 0.6
SRPRAP08240 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.8■□□□□ 0.6
SRPRAP08240 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRPRAP08240 AC093525.10-201ENST00000625130 1569 ntBASIC18.8■□□□□ 0.6
SRPRAP08240 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.8■□□□□ 0.6
SRPRAP08240 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SRPRAP08240 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.8■□□□□ 0.6
SRPRAP08240 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.79■□□□□ 0.6
SRPRAP08240 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.79■□□□□ 0.6
SRPRAP08240 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.79■□□□□ 0.6
SRPRAP08240 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SRPRAP08240 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
SRPRAP08240 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.79■□□□□ 0.6
SRPRAP08240 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.79■□□□□ 0.6
SRPRAP08240 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
SRPRAP08240 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms