Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
TRIM13O60858 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM13O60858 KRT8P45-201ENST00000414328 1447 ntBASIC18.39■□□□□ 0.53
TRIM13O60858 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM13O60858 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM13O60858 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM13O60858 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.39■□□□□ 0.53
TRIM13O60858 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 AL357033.4-201ENST00000617703 1807 ntBASIC18.38■□□□□ 0.53
TRIM13O60858 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.38■□□□□ 0.53
TRIM13O60858 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM13O60858 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM13O60858 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM13O60858 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM13O60858 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TRIM13O60858 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 PRSS44-201ENST00000515154 1146 ntBASIC18.37■□□□□ 0.53
TRIM13O60858 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM13O60858 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRIM13O60858 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM13O60858 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
TRIM13O60858 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRIM13O60858 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.36■□□□□ 0.53
TRIM13O60858 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM13O60858 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TRIM13O60858 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRIM13O60858 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM13O60858 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM13O60858 KRT17P3-201ENST00000420566 1262 ntBASIC18.36■□□□□ 0.53
TRIM13O60858 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM13O60858 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM13O60858 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM13O60858 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM13O60858 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms