Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 TMPOP1-202ENST00000424642 1267 ntBASIC17.44■□□□□ 0.38
HCN1O60741 AC008040.2-201ENST00000461049 708 ntBASIC17.44■□□□□ 0.38
HCN1O60741 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.44■□□□□ 0.38
HCN1O60741 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.44■□□□□ 0.38
HCN1O60741 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
HCN1O60741 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.44■□□□□ 0.38
HCN1O60741 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HCN1O60741 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.44■□□□□ 0.38
HCN1O60741 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HCN1O60741 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HCN1O60741 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
HCN1O60741 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.43■□□□□ 0.38
HCN1O60741 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.43■□□□□ 0.38
HCN1O60741 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HCN1O60741 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.43■□□□□ 0.38
HCN1O60741 MFAP1P1-201ENST00000442257 1255 ntBASIC17.43■□□□□ 0.38
HCN1O60741 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.43■□□□□ 0.38
HCN1O60741 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HCN1O60741 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.43■□□□□ 0.38
HCN1O60741 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.43■□□□□ 0.38
HCN1O60741 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HCN1O60741 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.43■□□□□ 0.38
HCN1O60741 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
HCN1O60741 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HCN1O60741 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.43■□□□□ 0.38
HCN1O60741 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HCN1O60741 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.42■□□□□ 0.38
HCN1O60741 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HCN1O60741 AC005521.1-201ENST00000393351 872 ntBASIC17.42■□□□□ 0.38
HCN1O60741 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.42■□□□□ 0.38
HCN1O60741 AL137013.1-201ENST00000432946 1228 ntBASIC17.42■□□□□ 0.38
HCN1O60741 SLC25A3P1-201ENST00000443844 931 ntBASIC17.42■□□□□ 0.38
HCN1O60741 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.42■□□□□ 0.38
HCN1O60741 AC010331.1-201ENST00000611423 582 ntBASIC17.42■□□□□ 0.38
HCN1O60741 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.42■□□□□ 0.38
HCN1O60741 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.42■□□□□ 0.38
HCN1O60741 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.42■□□□□ 0.38
HCN1O60741 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HCN1O60741 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.42■□□□□ 0.38
HCN1O60741 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.42■□□□□ 0.38
HCN1O60741 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.42■□□□□ 0.38
HCN1O60741 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HCN1O60741 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.41■□□□□ 0.38
HCN1O60741 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HCN1O60741 FP475955.4-201ENST00000623131 1990 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms