Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 Z85996.1-201ENST00000494644 937 ntBASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 AL512353.2-201ENST00000448759 1962 ntBASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.99□□□□□ -0.01
TCRBV4S1A1TA0A5B7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms