Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 MIR662-201ENST00000384847 95 ntBASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 AL162741.1-201ENST00000565563 1558 ntBASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.99■□□□□ 0.79
SMIM28A0A1B0GU29 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 PVRIG2P-201ENST00000435460 978 ntBASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 AC093458.2-201ENST00000623150 629 ntBASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMIM28A0A1B0GU29 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 AC011498.5-201ENST00000592027 486 ntBASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 AC069148.1-201ENST00000608741 768 ntBASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.97■□□□□ 0.79
SMIM28A0A1B0GU29 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 AP000593.1-201ENST00000393668 712 ntBASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMIM28A0A1B0GU29 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SMIM28A0A1B0GU29 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM28A0A1B0GU29 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms