Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 AC116562.4-202ENST00000641738 218 ntBASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 AC068587.9-201ENST00000641814 219 ntBASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV2A0A0B4J234 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 MMP23A-201ENST00000234610 1017 ntBASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 TSPY14P-201ENST00000303979 915 ntBASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 MIR1238-201ENST00000408483 83 ntBASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 AC128688.1-201ENST00000487626 519 ntBASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 EGLN1P1-201ENST00000531623 762 ntBASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 AC010653.2-201ENST00000623505 997 ntBASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 AC004408.2-201ENST00000623613 2777 ntBASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV2A0A0B4J234 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 AL109659.2-201ENST00000606809 1674 ntBASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 HEIH-201ENST00000623091 1652 ntBASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 AL596275.1-201ENST00000423464 877 ntBASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 AL353719.1-201ENST00000566847 864 ntBASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 AL023803.3-201ENST00000615559 522 ntBASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 MYC-208ENST00000641036 567 ntBASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 AP000974.1-201ENST00000623909 2387 ntBASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV2A0A0B4J234 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV2A0A0B4J234 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms