Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 NOC2LP2-201ENST00000407594 1944 ntBASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AC124283.5-201ENST00000624661 1809 ntBASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 OR6D1P-203ENST00000641209 4860 ntBASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 YBX1P10-201ENST00000444752 975 ntBASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 RN7SL471P-201ENST00000580476 299 ntBASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MTDHP1-201ENST00000605323 784 ntBASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 Z98044.1-201ENST00000632503 1764 ntBASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms