Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV30A0A087WSZ9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 RCC2P6-201ENST00000526625 1557 ntBASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV30A0A087WSZ9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 AC233263.1-201ENST00000578059 224 ntBASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV30A0A087WSZ9 KRT8P3-201ENST00000519669 1449 ntBASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 AC004951.3-201ENST00000418645 1148 ntBASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 AC004980.1-204ENST00000429707 299 ntBASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV30A0A087WSZ9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms