Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 AC105265.2-201ENST00000467189 838 ntBASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 REXO1L9P-201ENST00000604264 2108 ntBASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.25■□□□□ 0.67
PRDM4Q9UKN5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 AC104640.1-201ENST00000562617 2109 ntBASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 EEF1DP3-203ENST00000566025 782 ntBASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRDM4Q9UKN5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.23■□□□□ 0.67
PRDM4Q9UKN5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 LINC02228-203ENST00000641970 1355 ntBASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRDM4Q9UKN5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms