Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 AL355472.2-201ENST00000422958 438 ntBASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 AL645608.8-201ENST00000606034 2086 ntBASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 FER1L4-210ENST00000615531 5998 ntBASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.44■□□□□ 0.22
COMMD3Q9UBI1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 AC138028.4-201ENST00000564984 1845 ntBASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 SLC25A6P5-201ENST00000435663 894 ntBASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 AL499627.1-201ENST00000569373 2188 ntBASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
COMMD3Q9UBI1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
COMMD3Q9UBI1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms