Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HACD3Q9P035 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.9■□□□□ 0.62
HACD3Q9P035 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HACD3Q9P035 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.9■□□□□ 0.62
HACD3Q9P035 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
HACD3Q9P035 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HACD3Q9P035 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
HACD3Q9P035 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HACD3Q9P035 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.89■□□□□ 0.62
HACD3Q9P035 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
HACD3Q9P035 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HACD3Q9P035 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HACD3Q9P035 HEIH-201ENST00000623091 1652 ntBASIC18.89■□□□□ 0.61
HACD3Q9P035 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
HACD3Q9P035 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.89■□□□□ 0.61
HACD3Q9P035 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HACD3Q9P035 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.89■□□□□ 0.61
HACD3Q9P035 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.89■□□□□ 0.61
HACD3Q9P035 TSPY15P-201ENST00000457163 923 ntBASIC18.89■□□□□ 0.61
HACD3Q9P035 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.89■□□□□ 0.61
HACD3Q9P035 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HACD3Q9P035 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.89■□□□□ 0.61
HACD3Q9P035 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 AL023803.3-201ENST00000615559 522 ntBASIC18.89■□□□□ 0.61
HACD3Q9P035 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.89■□□□□ 0.61
HACD3Q9P035 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.89■□□□□ 0.61
HACD3Q9P035 AC116562.4-202ENST00000641738 218 ntBASIC18.89■□□□□ 0.61
HACD3Q9P035 AC068587.9-201ENST00000641814 219 ntBASIC18.89■□□□□ 0.61
HACD3Q9P035 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HACD3Q9P035 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HACD3Q9P035 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.89■□□□□ 0.61
HACD3Q9P035 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HACD3Q9P035 AC005082.1-201ENST00000413042 2259 ntBASIC18.89■□□□□ 0.61
HACD3Q9P035 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HACD3Q9P035 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.89■□□□□ 0.61
HACD3Q9P035 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HACD3Q9P035 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.89■□□□□ 0.61
HACD3Q9P035 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.88■□□□□ 0.61
HACD3Q9P035 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HACD3Q9P035 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.88■□□□□ 0.61
HACD3Q9P035 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.88■□□□□ 0.61
HACD3Q9P035 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.88■□□□□ 0.61
HACD3Q9P035 EGLN1P1-201ENST00000531623 762 ntBASIC18.88■□□□□ 0.61
HACD3Q9P035 NAPSB-206ENST00000562112 1266 ntBASIC18.88■□□□□ 0.61
HACD3Q9P035 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.88■□□□□ 0.61
HACD3Q9P035 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HACD3Q9P035 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.88■□□□□ 0.61
HACD3Q9P035 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.88■□□□□ 0.61
HACD3Q9P035 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
HACD3Q9P035 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
HACD3Q9P035 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HACD3Q9P035 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HACD3Q9P035 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HACD3Q9P035 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HACD3Q9P035 TSPY14P-201ENST00000303979 915 ntBASIC18.87■□□□□ 0.61
HACD3Q9P035 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HACD3Q9P035 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HACD3Q9P035 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HACD3Q9P035 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.87■□□□□ 0.61
HACD3Q9P035 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
HACD3Q9P035 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.87■□□□□ 0.61
HACD3Q9P035 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HACD3Q9P035 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.87■□□□□ 0.61
HACD3Q9P035 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HACD3Q9P035 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HACD3Q9P035 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HACD3Q9P035 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HACD3Q9P035 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HACD3Q9P035 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms