Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.81■□□□□ 0.44
VCX3BQ9H321 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.81■□□□□ 0.44
VCX3BQ9H321 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 AC104417.2-201ENST00000562989 1793 ntBASIC17.81■□□□□ 0.44
VCX3BQ9H321 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VCX3BQ9H321 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCX3BQ9H321 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 AC080080.1-201ENST00000625121 2420 ntBASIC17.8■□□□□ 0.44
VCX3BQ9H321 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.8■□□□□ 0.44
VCX3BQ9H321 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCX3BQ9H321 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.79■□□□□ 0.44
VCX3BQ9H321 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.79■□□□□ 0.44
VCX3BQ9H321 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCX3BQ9H321 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 AC135776.1-201ENST00000319817 2481 ntBASIC17.78■□□□□ 0.44
VCX3BQ9H321 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 AC116351.2-201ENST00000606540 1585 ntBASIC17.78■□□□□ 0.44
VCX3BQ9H321 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VCX3BQ9H321 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VCX3BQ9H321 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.77■□□□□ 0.44
VCX3BQ9H321 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
VCX3BQ9H321 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms