Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 AL023875.1-201ENST00000640777 796 ntBASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 AC068587.9-201ENST00000641814 219 ntBASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.79■□□□□ 0.12
HDHD3Q9BSH5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 KRT8P11-201ENST00000409686 1436 ntBASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 POU5F1P3-201ENST00000428824 1078 ntBASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 AP003097.1-201ENST00000530657 1135 ntBASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HDHD3Q9BSH5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 KRASP1-201ENST00000407852 552 ntBASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 RNA5SP413-201ENST00000516373 109 ntBASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
HDHD3Q9BSH5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 AC135776.1-201ENST00000319817 2481 ntBASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 AP000997.3-201ENST00000623333 2250 ntBASIC15.77■□□□□ 0.11
HDHD3Q9BSH5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms