Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LMO3Q8TAP4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LMO3Q8TAP4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.02■□□□□ 0.79
LMO3Q8TAP4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 FAM87A-204ENST00000613235 858 ntBASIC20.01■□□□□ 0.79
LMO3Q8TAP4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 HOXB1-202ENST00000577092 1414 ntBASIC20.01■□□□□ 0.79
LMO3Q8TAP4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.01■□□□□ 0.79
LMO3Q8TAP4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20■□□□□ 0.79
LMO3Q8TAP4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20■□□□□ 0.79
LMO3Q8TAP4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20■□□□□ 0.79
LMO3Q8TAP4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20■□□□□ 0.79
LMO3Q8TAP4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20■□□□□ 0.79
LMO3Q8TAP4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20■□□□□ 0.79
LMO3Q8TAP4 GXYLT1P6-201ENST00000456472 1187 ntBASIC20■□□□□ 0.79
LMO3Q8TAP4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20■□□□□ 0.79
LMO3Q8TAP4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20■□□□□ 0.79
LMO3Q8TAP4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20■□□□□ 0.79
LMO3Q8TAP4 NAPSB-206ENST00000562112 1266 ntBASIC20■□□□□ 0.79
LMO3Q8TAP4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LMO3Q8TAP4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20■□□□□ 0.79
LMO3Q8TAP4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LMO3Q8TAP4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20■□□□□ 0.79
LMO3Q8TAP4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20■□□□□ 0.79
LMO3Q8TAP4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20■□□□□ 0.79
LMO3Q8TAP4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20■□□□□ 0.79
LMO3Q8TAP4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LMO3Q8TAP4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 AP000593.1-201ENST00000393668 712 ntBASIC19.99■□□□□ 0.79
LMO3Q8TAP4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LMO3Q8TAP4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LMO3Q8TAP4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms