Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.37■■□□□ 1.33
LINS1Q8NG48 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.37■■□□□ 1.33
LINS1Q8NG48 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.37■■□□□ 1.33
LINS1Q8NG48 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.37■■□□□ 1.33
LINS1Q8NG48 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
LINS1Q8NG48 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
LINS1Q8NG48 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
LINS1Q8NG48 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.36■■□□□ 1.33
LINS1Q8NG48 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 AP000593.1-201ENST00000393668 712 ntBASIC23.36■■□□□ 1.33
LINS1Q8NG48 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
LINS1Q8NG48 UPK3BP1-201ENST00000428678 509 ntBASIC23.36■■□□□ 1.33
LINS1Q8NG48 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.36■■□□□ 1.33
LINS1Q8NG48 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.36■■□□□ 1.33
LINS1Q8NG48 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.36■■□□□ 1.33
LINS1Q8NG48 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.36■■□□□ 1.33
LINS1Q8NG48 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
LINS1Q8NG48 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
LINS1Q8NG48 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LINS1Q8NG48 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
LINS1Q8NG48 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LINS1Q8NG48 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LINS1Q8NG48 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LINS1Q8NG48 PVRIG2P-201ENST00000435460 978 ntBASIC23.35■■□□□ 1.33
LINS1Q8NG48 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LINS1Q8NG48 USF2-205ENST00000594064 1179 ntTSL 2 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
LINS1Q8NG48 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
LINS1Q8NG48 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.34■■□□□ 1.33
LINS1Q8NG48 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC23.34■■□□□ 1.33
LINS1Q8NG48 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 AL645929.1-201ENST00000420084 975 ntBASIC23.34■■□□□ 1.33
LINS1Q8NG48 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.34■■□□□ 1.33
LINS1Q8NG48 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
LINS1Q8NG48 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
LINS1Q8NG48 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LINS1Q8NG48 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LINS1Q8NG48 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LINS1Q8NG48 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 MIR662-201ENST00000384847 95 ntBASIC23.33■■□□□ 1.33
LINS1Q8NG48 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LINS1Q8NG48 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LINS1Q8NG48 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LINS1Q8NG48 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.33■■□□□ 1.33
LINS1Q8NG48 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
LINS1Q8NG48 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LINS1Q8NG48 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.33■■□□□ 1.32
LINS1Q8NG48 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LINS1Q8NG48 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.33■■□□□ 1.32
LINS1Q8NG48 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
LINS1Q8NG48 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
LINS1Q8NG48 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms