Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
USP38Q8NB14 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP38Q8NB14 AC112907.2-201ENST00000448639 330 ntBASIC20.84■□□□□ 0.93
USP38Q8NB14 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.84■□□□□ 0.93
USP38Q8NB14 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
USP38Q8NB14 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP38Q8NB14 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.84■□□□□ 0.93
USP38Q8NB14 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP38Q8NB14 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.83■□□□□ 0.93
USP38Q8NB14 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
USP38Q8NB14 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
USP38Q8NB14 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP38Q8NB14 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP38Q8NB14 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP38Q8NB14 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.83■□□□□ 0.93
USP38Q8NB14 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP38Q8NB14 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.83■□□□□ 0.93
USP38Q8NB14 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP38Q8NB14 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP38Q8NB14 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP38Q8NB14 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP38Q8NB14 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP38Q8NB14 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
USP38Q8NB14 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.83■□□□□ 0.92
USP38Q8NB14 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP38Q8NB14 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP38Q8NB14 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP38Q8NB14 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
USP38Q8NB14 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP38Q8NB14 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP38Q8NB14 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP38Q8NB14 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP38Q8NB14 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.82■□□□□ 0.92
USP38Q8NB14 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
USP38Q8NB14 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.82■□□□□ 0.92
USP38Q8NB14 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.82■□□□□ 0.92
USP38Q8NB14 GCSHP2-201ENST00000560971 527 ntBASIC20.82■□□□□ 0.92
USP38Q8NB14 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
USP38Q8NB14 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.82■□□□□ 0.92
USP38Q8NB14 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
USP38Q8NB14 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP38Q8NB14 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.82■□□□□ 0.92
USP38Q8NB14 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.81■□□□□ 0.92
USP38Q8NB14 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.81■□□□□ 0.92
USP38Q8NB14 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.81■□□□□ 0.92
USP38Q8NB14 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
USP38Q8NB14 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.81■□□□□ 0.92
USP38Q8NB14 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 MIR4674-201ENST00000582457 87 ntBASIC20.81■□□□□ 0.92
USP38Q8NB14 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
USP38Q8NB14 HYMAI.1-201ENST00000620949 238 ntBASIC20.81■□□□□ 0.92
USP38Q8NB14 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.81■□□□□ 0.92
USP38Q8NB14 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.81■□□□□ 0.92
USP38Q8NB14 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.81■□□□□ 0.92
USP38Q8NB14 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP38Q8NB14 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.8■□□□□ 0.92
USP38Q8NB14 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.8■□□□□ 0.92
USP38Q8NB14 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.8■□□□□ 0.92
USP38Q8NB14 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.8■□□□□ 0.92
USP38Q8NB14 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
USP38Q8NB14 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.8■□□□□ 0.92
USP38Q8NB14 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.8■□□□□ 0.92
USP38Q8NB14 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.8■□□□□ 0.92
USP38Q8NB14 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.8■□□□□ 0.92
USP38Q8NB14 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.8■□□□□ 0.92
USP38Q8NB14 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
USP38Q8NB14 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 AL032819.2-201ENST00000624543 2162 ntBASIC20.8■□□□□ 0.92
USP38Q8NB14 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.8■□□□□ 0.92
USP38Q8NB14 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP38Q8NB14 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms