Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRTM1Q86UE6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 AC134043.2-201ENST00000624206 2238 ntBASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 KRT8P32-201ENST00000512863 1461 ntBASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 GNAS-203ENST00000306120 1878 ntBASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 MIR4758-201ENST00000577688 71 ntBASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 IKBKGP1-201ENST00000612193 1073 ntBASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 MYC-208ENST00000641036 567 ntBASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM1Q86UE6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 AC112777.1-201ENST00000540175 1423 ntBASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 SLC25A6P5-201ENST00000435663 894 ntBASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM1Q86UE6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 POU5F1P3-201ENST00000428824 1078 ntBASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 AC083880.1-201ENST00000608266 535 ntBASIC16.21■□□□□ 0.19
LRRTM1Q86UE6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms