Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SHFQ7M4L6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHFQ7M4L6 AC012313.1-201ENST00000593393 3059 ntBASIC16.9■□□□□ 0.3
SHFQ7M4L6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 TSPY21P-201ENST00000433481 731 ntBASIC16.9■□□□□ 0.3
SHFQ7M4L6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.9■□□□□ 0.3
SHFQ7M4L6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHFQ7M4L6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SHFQ7M4L6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SHFQ7M4L6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SHFQ7M4L6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 TSPY23P-201ENST00000440136 739 ntBASIC16.89■□□□□ 0.29
SHFQ7M4L6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 AC104771.1-201ENST00000603335 964 ntBASIC16.89■□□□□ 0.29
SHFQ7M4L6 AC004264.1-201ENST00000608354 794 ntBASIC16.89■□□□□ 0.29
SHFQ7M4L6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHFQ7M4L6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.89■□□□□ 0.29
SHFQ7M4L6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 UNC93B5-201ENST00000530315 699 ntBASIC16.88■□□□□ 0.29
SHFQ7M4L6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SHFQ7M4L6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms