Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AC026271.2-201ENST00000428091 497 ntBASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AL162430.1-201ENST00000480705 870 ntBASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 PNMA6B-201ENST00000538162 1200 ntBASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AC022517.1-201ENST00000592429 346 ntBASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AC068587.9-201ENST00000641814 219 ntBASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LINC00242Q5T6M2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 CDCA4P2-201ENST00000441182 718 ntBASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 AC060766.5-201ENST00000590539 871 ntBASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 HLA-A-209ENST00000638375 975 ntBASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC00242Q5T6M2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LINC00242Q5T6M2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00242Q5T6M2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00242Q5T6M2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00242Q5T6M2 AC093677.2-201ENST00000600169 1863 ntBASIC12.77□□□□□ -0.37
LINC00242Q5T6M2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00242Q5T6M2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00242Q5T6M2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00242Q5T6M2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms