Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SYPL1Q16563 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
SYPL1Q16563 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYPL1Q16563 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.41■□□□□ 0.38
SYPL1Q16563 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SYPL1Q16563 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SYPL1Q16563 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYPL1Q16563 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SYPL1Q16563 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.41■□□□□ 0.38
SYPL1Q16563 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SYPL1Q16563 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
SYPL1Q16563 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.4■□□□□ 0.38
SYPL1Q16563 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.4■□□□□ 0.38
SYPL1Q16563 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SYPL1Q16563 AL135905.2-201ENST00000584934 1404 ntBASIC17.4■□□□□ 0.38
SYPL1Q16563 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SYPL1Q16563 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SYPL1Q16563 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 AL158047.1-201ENST00000445918 881 ntBASIC17.4■□□□□ 0.38
SYPL1Q16563 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.4■□□□□ 0.38
SYPL1Q16563 AP000692.2-201ENST00000608391 879 ntBASIC17.4■□□□□ 0.38
SYPL1Q16563 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SYPL1Q16563 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYPL1Q16563 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.4■□□□□ 0.38
SYPL1Q16563 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
SYPL1Q16563 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SYPL1Q16563 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SYPL1Q16563 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SYPL1Q16563 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
SYPL1Q16563 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.39■□□□□ 0.37
SYPL1Q16563 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.39■□□□□ 0.37
SYPL1Q16563 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.39■□□□□ 0.37
SYPL1Q16563 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.39■□□□□ 0.37
SYPL1Q16563 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SYPL1Q16563 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.39■□□□□ 0.37
SYPL1Q16563 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SYPL1Q16563 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.39■□□□□ 0.37
SYPL1Q16563 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.39■□□□□ 0.37
SYPL1Q16563 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SYPL1Q16563 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYPL1Q16563 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.39■□□□□ 0.37
SYPL1Q16563 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYPL1Q16563 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SYPL1Q16563 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.38■□□□□ 0.37
SYPL1Q16563 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.38■□□□□ 0.37
SYPL1Q16563 AC079598.2-202ENST00000546624 1451 ntBASIC17.38■□□□□ 0.37
SYPL1Q16563 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYPL1Q16563 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SYPL1Q16563 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.38■□□□□ 0.37
SYPL1Q16563 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYPL1Q16563 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYPL1Q16563 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.38■□□□□ 0.37
SYPL1Q16563 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.38■□□□□ 0.37
SYPL1Q16563 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYPL1Q16563 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYPL1Q16563 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.38■□□□□ 0.37
SYPL1Q16563 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SYPL1Q16563 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.38■□□□□ 0.37
SYPL1Q16563 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.38■□□□□ 0.37
SYPL1Q16563 GCSHP5-201ENST00000443090 522 ntBASIC17.38■□□□□ 0.37
SYPL1Q16563 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYPL1Q16563 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.38■□□□□ 0.37
SYPL1Q16563 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.38■□□□□ 0.37
SYPL1Q16563 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.38■□□□□ 0.37
SYPL1Q16563 AC008622.2-201ENST00000617006 1229 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms