Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLCNKAP51800 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLCNKAP51800 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLCNKAP51800 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 HOXB1-202ENST00000577092 1414 ntBASIC18.32■□□□□ 0.52
CLCNKAP51800 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLCNKAP51800 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.32■□□□□ 0.52
CLCNKAP51800 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.31■□□□□ 0.52
CLCNKAP51800 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.31■□□□□ 0.52
CLCNKAP51800 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CLCNKAP51800 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLCNKAP51800 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.31■□□□□ 0.52
CLCNKAP51800 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.31■□□□□ 0.52
CLCNKAP51800 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.31■□□□□ 0.52
CLCNKAP51800 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLCNKAP51800 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.31■□□□□ 0.52
CLCNKAP51800 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.31■□□□□ 0.52
CLCNKAP51800 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 AL020996.1-203ENST00000536896 2307 ntBASIC18.31■□□□□ 0.52
CLCNKAP51800 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLCNKAP51800 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCNKAP51800 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCNKAP51800 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CLCNKAP51800 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLCNKAP51800 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCNKAP51800 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLCNKAP51800 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CLCNKAP51800 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCNKAP51800 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.3■□□□□ 0.52
CLCNKAP51800 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLCNKAP51800 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLCNKAP51800 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCNKAP51800 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCNKAP51800 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLCNKAP51800 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCNKAP51800 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.29■□□□□ 0.52
CLCNKAP51800 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CLCNKAP51800 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.29■□□□□ 0.52
CLCNKAP51800 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCNKAP51800 AC112497.1-201ENST00000624824 639 ntBASIC18.29■□□□□ 0.52
CLCNKAP51800 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLCNKAP51800 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCNKAP51800 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCNKAP51800 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.29■□□□□ 0.52
CLCNKAP51800 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.29■□□□□ 0.52
CLCNKAP51800 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms