Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ARCN1P48444 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.73■□□□□ 0.59
ARCN1P48444 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARCN1P48444 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.73■□□□□ 0.59
ARCN1P48444 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARCN1P48444 ECEL1P3-201ENST00000427961 737 ntBASIC18.73■□□□□ 0.59
ARCN1P48444 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.73■□□□□ 0.59
ARCN1P48444 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ARCN1P48444 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARCN1P48444 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARCN1P48444 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
ARCN1P48444 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARCN1P48444 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ARCN1P48444 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARCN1P48444 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARCN1P48444 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.73■□□□□ 0.59
ARCN1P48444 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARCN1P48444 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARCN1P48444 AL109659.2-201ENST00000606809 1674 ntBASIC18.73■□□□□ 0.59
ARCN1P48444 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.73■□□□□ 0.59
ARCN1P48444 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.72■□□□□ 0.59
ARCN1P48444 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.72■□□□□ 0.59
ARCN1P48444 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 MIR1238-201ENST00000408483 83 ntBASIC18.72■□□□□ 0.59
ARCN1P48444 AC211429.1-201ENST00000415277 523 ntBASIC18.72■□□□□ 0.59
ARCN1P48444 AC087499.1-201ENST00000418141 1075 ntBASIC18.72■□□□□ 0.59
ARCN1P48444 MFAP1P1-201ENST00000442257 1255 ntBASIC18.72■□□□□ 0.59
ARCN1P48444 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.72■□□□□ 0.59
ARCN1P48444 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.72■□□□□ 0.59
ARCN1P48444 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.72■□□□□ 0.59
ARCN1P48444 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.72■□□□□ 0.59
ARCN1P48444 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.72■□□□□ 0.59
ARCN1P48444 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ARCN1P48444 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.72■□□□□ 0.59
ARCN1P48444 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 KRT8P9-201ENST00000558927 1449 ntBASIC18.72■□□□□ 0.59
ARCN1P48444 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
ARCN1P48444 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.72■□□□□ 0.59
ARCN1P48444 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ARCN1P48444 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.72■□□□□ 0.59
ARCN1P48444 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARCN1P48444 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ARCN1P48444 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ARCN1P48444 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.71■□□□□ 0.59
ARCN1P48444 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.71■□□□□ 0.59
ARCN1P48444 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.71■□□□□ 0.59
ARCN1P48444 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.71■□□□□ 0.59
ARCN1P48444 AC097488.1-201ENST00000507834 756 ntBASIC18.71■□□□□ 0.59
ARCN1P48444 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.71■□□□□ 0.59
ARCN1P48444 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.71■□□□□ 0.59
ARCN1P48444 SLC25A1P4-201ENST00000567977 778 ntBASIC18.71■□□□□ 0.59
ARCN1P48444 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.71■□□□□ 0.59
ARCN1P48444 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 KRT8P45-201ENST00000414328 1447 ntBASIC18.71■□□□□ 0.59
ARCN1P48444 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.71■□□□□ 0.59
ARCN1P48444 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
ARCN1P48444 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 AL354751.1-201ENST00000412768 1863 ntBASIC18.71■□□□□ 0.59
ARCN1P48444 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.71■□□□□ 0.59
ARCN1P48444 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.71■□□□□ 0.59
ARCN1P48444 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARCN1P48444 AC008556.1-201ENST00000610908 2040 ntBASIC18.71■□□□□ 0.59
ARCN1P48444 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ARCN1P48444 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ARCN1P48444 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.7■□□□□ 0.58
ARCN1P48444 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ARCN1P48444 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ARCN1P48444 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.7■□□□□ 0.58
ARCN1P48444 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ARCN1P48444 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 AC007613.1-201ENST00000572811 2597 ntBASIC18.7■□□□□ 0.58
ARCN1P48444 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.7■□□□□ 0.58
ARCN1P48444 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 UNC93B2-201ENST00000285383 730 ntBASIC18.7■□□□□ 0.58
ARCN1P48444 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.7■□□□□ 0.58
ARCN1P48444 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARCN1P48444 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.7■□□□□ 0.58
ARCN1P48444 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.7■□□□□ 0.58
ARCN1P48444 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.7■□□□□ 0.58
ARCN1P48444 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms