Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APCP25054 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.69■□□□□ 0.1
APCP25054 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.69■□□□□ 0.1
APCP25054 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.69■□□□□ 0.1
APCP25054 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.69■□□□□ 0.1
APCP25054 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.69■□□□□ 0.1
APCP25054 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.69■□□□□ 0.1
APCP25054 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.69■□□□□ 0.1
APCP25054 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
APCP25054 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.69■□□□□ 0.1
APCP25054 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APCP25054 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 AC254562.1-201ENST00000417586 456 ntBASIC15.68■□□□□ 0.1
APCP25054 MCCD1P2-201ENST00000423228 335 ntBASIC15.68■□□□□ 0.1
APCP25054 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.68■□□□□ 0.1
APCP25054 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
APCP25054 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.68■□□□□ 0.1
APCP25054 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.68■□□□□ 0.1
APCP25054 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.68■□□□□ 0.1
APCP25054 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.68■□□□□ 0.1
APCP25054 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.68■□□□□ 0.1
APCP25054 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
APCP25054 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.68■□□□□ 0.1
APCP25054 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.68■□□□□ 0.1
APCP25054 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APCP25054 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.68■□□□□ 0.1
APCP25054 COX20P2-201ENST00000452636 358 ntBASIC15.67■□□□□ 0.1
APCP25054 OR7E14P-202ENST00000530490 1290 ntBASIC15.67■□□□□ 0.1
APCP25054 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.67■□□□□ 0.1
APCP25054 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APCP25054 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.67■□□□□ 0.1
APCP25054 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
APCP25054 TP73-AS1-210ENST00000637775 1455 ntBASIC15.67■□□□□ 0.1
APCP25054 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APCP25054 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
APCP25054 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APCP25054 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.67■□□□□ 0.1
APCP25054 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.67■□□□□ 0.1
APCP25054 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.67■□□□□ 0.1
APCP25054 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.67■□□□□ 0.1
APCP25054 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.67■□□□□ 0.1
APCP25054 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.67■□□□□ 0.1
APCP25054 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.67■□□□□ 0.1
APCP25054 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.67■□□□□ 0.1
APCP25054 AC012645.4-201ENST00000610691 1061 ntBASIC15.67■□□□□ 0.1
APCP25054 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.67■□□□□ 0.1
APCP25054 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
APCP25054 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
APCP25054 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.67■□□□□ 0.1
APCP25054 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
APCP25054 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.67■□□□□ 0.1
APCP25054 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
APCP25054 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
APCP25054 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
APCP25054 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
APCP25054 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APCP25054 ALG1L5P-201ENST00000482043 771 ntBASIC15.67■□□□□ 0.1
APCP25054 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.67■□□□□ 0.1
APCP25054 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.67■□□□□ 0.1
APCP25054 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.67■□□□□ 0.1
APCP25054 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.67■□□□□ 0.1
APCP25054 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APCP25054 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 AL512353.2-201ENST00000448759 1962 ntBASIC15.66■□□□□ 0.1
APCP25054 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
APCP25054 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
APCP25054 AC099343.3-201ENST00000605834 2503 ntBASIC15.66■□□□□ 0.1
APCP25054 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.66■□□□□ 0.1
APCP25054 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.66■□□□□ 0.1
APCP25054 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.66■□□□□ 0.1
APCP25054 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.66■□□□□ 0.1
APCP25054 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
APCP25054 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
APCP25054 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
APCP25054 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.66■□□□□ 0.1
APCP25054 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.66■□□□□ 0.1
APCP25054 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.66■□□□□ 0.1
APCP25054 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.66■□□□□ 0.1
APCP25054 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.66■□□□□ 0.1
APCP25054 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
APCP25054 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APCP25054 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
APCP25054 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms