Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBCP0CG48 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 HTR7P1-202ENST00000624664 4411 ntBASIC16.4■□□□□ 0.22
UBCP0CG48 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.4■□□□□ 0.22
UBCP0CG48 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.4■□□□□ 0.22
UBCP0CG48 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.4■□□□□ 0.22
UBCP0CG48 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
UBCP0CG48 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.4■□□□□ 0.22
UBCP0CG48 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
UBCP0CG48 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 POU5F1P3-201ENST00000428824 1078 ntBASIC16.4■□□□□ 0.22
UBCP0CG48 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.4■□□□□ 0.22
UBCP0CG48 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 AC026366.1-201ENST00000488803 879 ntBASIC16.4■□□□□ 0.22
UBCP0CG48 PRSS44-201ENST00000515154 1146 ntBASIC16.4■□□□□ 0.22
UBCP0CG48 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.4■□□□□ 0.22
UBCP0CG48 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.4■□□□□ 0.22
UBCP0CG48 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.4■□□□□ 0.22
UBCP0CG48 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.4■□□□□ 0.22
UBCP0CG48 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
UBCP0CG48 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.4■□□□□ 0.22
UBCP0CG48 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.4■□□□□ 0.22
UBCP0CG48 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
UBCP0CG48 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBCP0CG48 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBCP0CG48 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBCP0CG48 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.39■□□□□ 0.22
UBCP0CG48 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
UBCP0CG48 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
UBCP0CG48 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.39■□□□□ 0.21
UBCP0CG48 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.39■□□□□ 0.21
UBCP0CG48 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
UBCP0CG48 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.39■□□□□ 0.21
UBCP0CG48 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 KRASP1-201ENST00000407852 552 ntBASIC16.39■□□□□ 0.21
UBCP0CG48 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
UBCP0CG48 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.39■□□□□ 0.21
UBCP0CG48 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 AL445675.2-201ENST00000620291 557 ntBASIC16.39■□□□□ 0.21
UBCP0CG48 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 AC068587.9-201ENST00000641814 219 ntBASIC16.39■□□□□ 0.21
UBCP0CG48 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
UBCP0CG48 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
UBCP0CG48 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.39■□□□□ 0.21
UBCP0CG48 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
UBCP0CG48 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.39■□□□□ 0.21
UBCP0CG48 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.39■□□□□ 0.21
UBCP0CG48 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.39■□□□□ 0.21
UBCP0CG48 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
UBCP0CG48 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.39■□□□□ 0.21
UBCP0CG48 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBCP0CG48 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
UBCP0CG48 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
UBCP0CG48 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.38■□□□□ 0.21
UBCP0CG48 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
UBCP0CG48 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBCP0CG48 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.38■□□□□ 0.21
UBCP0CG48 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.38■□□□□ 0.21
UBCP0CG48 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 RNA5SP413-201ENST00000516373 109 ntBASIC16.38■□□□□ 0.21
UBCP0CG48 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.38■□□□□ 0.21
UBCP0CG48 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.38■□□□□ 0.21
UBCP0CG48 AC131212.4-201ENST00000623606 975 ntBASIC16.38■□□□□ 0.21
UBCP0CG48 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.38■□□□□ 0.21
UBCP0CG48 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBCP0CG48 MTMR9LP-203ENST00000426597 1545 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms