Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.2■□□□□ 0.34
THBS1P07996 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.2■□□□□ 0.34
THBS1P07996 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
THBS1P07996 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.2■□□□□ 0.34
THBS1P07996 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.2■□□□□ 0.34
THBS1P07996 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.2■□□□□ 0.34
THBS1P07996 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.2■□□□□ 0.34
THBS1P07996 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.2■□□□□ 0.34
THBS1P07996 SLC25A1P4-201ENST00000567977 778 ntBASIC17.2■□□□□ 0.34
THBS1P07996 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.2■□□□□ 0.34
THBS1P07996 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
THBS1P07996 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
THBS1P07996 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
THBS1P07996 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
THBS1P07996 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
THBS1P07996 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
THBS1P07996 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.2■□□□□ 0.34
THBS1P07996 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
THBS1P07996 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.19■□□□□ 0.34
THBS1P07996 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.19■□□□□ 0.34
THBS1P07996 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.19■□□□□ 0.34
THBS1P07996 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.19■□□□□ 0.34
THBS1P07996 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
THBS1P07996 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.19■□□□□ 0.34
THBS1P07996 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.19■□□□□ 0.34
THBS1P07996 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.19■□□□□ 0.34
THBS1P07996 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.19■□□□□ 0.34
THBS1P07996 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 AC097488.1-201ENST00000507834 756 ntBASIC17.19■□□□□ 0.34
THBS1P07996 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.19■□□□□ 0.34
THBS1P07996 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.19■□□□□ 0.34
THBS1P07996 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.19■□□□□ 0.34
THBS1P07996 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.19■□□□□ 0.34
THBS1P07996 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.19■□□□□ 0.34
THBS1P07996 AC008622.2-201ENST00000617006 1229 ntBASIC17.19■□□□□ 0.34
THBS1P07996 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.19■□□□□ 0.34
THBS1P07996 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
THBS1P07996 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.19■□□□□ 0.34
THBS1P07996 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
THBS1P07996 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.19■□□□□ 0.34
THBS1P07996 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.18■□□□□ 0.34
THBS1P07996 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.18■□□□□ 0.34
THBS1P07996 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
THBS1P07996 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
THBS1P07996 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.18■□□□□ 0.34
THBS1P07996 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.18■□□□□ 0.34
THBS1P07996 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.18■□□□□ 0.34
THBS1P07996 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.18■□□□□ 0.34
THBS1P07996 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.18■□□□□ 0.34
THBS1P07996 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.18■□□□□ 0.34
THBS1P07996 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.18■□□□□ 0.34
THBS1P07996 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
THBS1P07996 REXO1L10P-201ENST00000615707 1290 ntBASIC17.18■□□□□ 0.34
THBS1P07996 REXO1L12P-201ENST00000622156 912 ntBASIC17.18■□□□□ 0.34
THBS1P07996 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
THBS1P07996 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
THBS1P07996 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.18■□□□□ 0.34
THBS1P07996 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
THBS1P07996 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.18■□□□□ 0.34
THBS1P07996 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.18■□□□□ 0.34
THBS1P07996 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
THBS1P07996 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.18■□□□□ 0.34
THBS1P07996 AC008556.1-201ENST00000610908 2040 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms