Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.45■■□□□ 1.18
CHGBP05060 BX323043.1-201ENST00000641006 1765 ntBASIC22.45■■□□□ 1.18
CHGBP05060 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.45■■□□□ 1.18
CHGBP05060 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHGBP05060 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.44■■□□□ 1.18
CHGBP05060 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.44■■□□□ 1.18
CHGBP05060 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHGBP05060 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHGBP05060 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CHGBP05060 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CHGBP05060 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.44■■□□□ 1.18
CHGBP05060 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CHGBP05060 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
CHGBP05060 KRT18P23-201ENST00000435622 1283 ntBASIC22.44■■□□□ 1.18
CHGBP05060 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHGBP05060 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHGBP05060 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHGBP05060 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
CHGBP05060 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHGBP05060 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.44■■□□□ 1.18
CHGBP05060 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.44■■□□□ 1.18
CHGBP05060 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.44■■□□□ 1.18
CHGBP05060 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC22.44■■□□□ 1.18
CHGBP05060 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.44■■□□□ 1.18
CHGBP05060 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.44■■□□□ 1.18
CHGBP05060 AC104581.1-202ENST00000635932 2618 ntBASIC22.44■■□□□ 1.18
CHGBP05060 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CHGBP05060 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 AC126763.1-201ENST00000552015 2118 ntBASIC22.43■■□□□ 1.18
CHGBP05060 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.43■■□□□ 1.18
CHGBP05060 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.43■■□□□ 1.18
CHGBP05060 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CHGBP05060 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CHGBP05060 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 AC093525.10-201ENST00000625130 1569 ntBASIC22.43■■□□□ 1.18
CHGBP05060 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 KRT8P50-201ENST00000562022 1438 ntBASIC22.43■■□□□ 1.18
CHGBP05060 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CHGBP05060 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 AP000523.1-201ENST00000398242 1049 ntBASIC22.43■■□□□ 1.18
CHGBP05060 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC22.43■■□□□ 1.18
CHGBP05060 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.43■■□□□ 1.18
CHGBP05060 NEK4P2-201ENST00000580004 1012 ntBASIC22.43■■□□□ 1.18
CHGBP05060 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.43■■□□□ 1.18
CHGBP05060 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHGBP05060 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CHGBP05060 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.42■■□□□ 1.18
CHGBP05060 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.42■■□□□ 1.18
CHGBP05060 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.42■■□□□ 1.18
CHGBP05060 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CHGBP05060 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.42■■□□□ 1.18
CHGBP05060 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.42■■□□□ 1.18
CHGBP05060 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.42■■□□□ 1.18
CHGBP05060 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.42■■□□□ 1.18
CHGBP05060 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.42■■□□□ 1.18
CHGBP05060 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
CHGBP05060 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CHGBP05060 AC140113.3-201ENST00000605663 199 ntBASIC22.42■■□□□ 1.18
CHGBP05060 HYMAI.1-201ENST00000620949 238 ntBASIC22.42■■□□□ 1.18
CHGBP05060 AC079602.3-201ENST00000623931 403 ntBASIC22.42■■□□□ 1.18
CHGBP05060 MYC-208ENST00000641036 567 ntBASIC22.42■■□□□ 1.18
CHGBP05060 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC22.42■■□□□ 1.18
CHGBP05060 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHGBP05060 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.42■■□□□ 1.18
CHGBP05060 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CHGBP05060 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.41■■□□□ 1.18
CHGBP05060 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.41■■□□□ 1.18
CHGBP05060 AC092597.1-201ENST00000487352 616 ntBASIC22.41■■□□□ 1.18
CHGBP05060 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.41■■□□□ 1.18
CHGBP05060 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CHGBP05060 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms