Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV5-3A0A0A0MS03 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV5-3A0A0A0MS03 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV5-3A0A0A0MS03 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.52■□□□□ 0.39
TRBV5-3A0A0A0MS03 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
TRBV5-3A0A0A0MS03 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
TRBV5-3A0A0A0MS03 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.52■□□□□ 0.39
TRBV5-3A0A0A0MS03 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV5-3A0A0A0MS03 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRBV5-3A0A0A0MS03 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 LINC00896-202ENST00000609602 2128 ntBASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC134043.2-201ENST00000624206 2238 ntBASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRBV5-3A0A0A0MS03 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 GNAS-203ENST00000306120 1878 ntBASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 AP002982.1-201ENST00000492365 877 ntBASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC011298.2-201ENST00000617989 482 ntBASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC130371.2-201ENST00000619443 611 ntBASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV5-3A0A0A0MS03 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 KRT16P1-201ENST00000399124 1418 ntBASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 ESRRAP1-201ENST00000400596 1257 ntBASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 REXO1L9P-201ENST00000604264 2108 ntBASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC092666.2-201ENST00000613287 246 ntBASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 AC008622.2-201ENST00000617006 1229 ntBASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV5-3A0A0A0MS03 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms