Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP4B1Q9Y6B7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP4B1Q9Y6B7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
AP4B1Q9Y6B7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 LINC00896-202ENST00000609602 2128 ntBASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 HTR7P1-202ENST00000624664 4411 ntBASIC17.95■□□□□ 0.46
AP4B1Q9Y6B7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 PHGDH-210ENST00000641115 1638 ntBASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 PRORSD1P-201ENST00000295112 541 ntBASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 AL121829.2-201ENST00000620908 328 ntBASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 ANO7L1-203ENST00000602586 1720 ntBASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.94■□□□□ 0.46
AP4B1Q9Y6B7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
AP4B1Q9Y6B7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms