Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
CYP46A1Q9Y6A2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.2■■□□□ 1.15
CYP46A1Q9Y6A2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CYP46A1Q9Y6A2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 MFAP1P1-201ENST00000442257 1255 ntBASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 AC008622.2-201ENST00000617006 1229 ntBASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CYP46A1Q9Y6A2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 REXO1L10P-201ENST00000615707 1290 ntBASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 REXO1L12P-201ENST00000622156 912 ntBASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 AC007613.1-201ENST00000572811 2597 ntBASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.19■■□□□ 1.14
CYP46A1Q9Y6A2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 AC097488.1-201ENST00000507834 756 ntBASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 MYC-208ENST00000641036 567 ntBASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 AL390961.4-201ENST00000623958 2535 ntBASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.18■■□□□ 1.14
CYP46A1Q9Y6A2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CYP46A1Q9Y6A2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms